They left the wrecked train there
https://www.youtube.com/watch?v=AJWdMm8J0lc
shareI'm sure they cleaned up the wrecked train after Gerard and his team go after Kimble. They didn't really need to show it cause it's really not relevant to the plot.
Green Goblin is great! https://www.youtube.com/watch?v=t1L4ZuaVvaw
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It's still all there, or at least it was 3 years ago. There were actually 3 locomotives used in the movie, but now the Great Smoky Mountain Railway owns the other two and still uses them. They've done an excellent job of maintaining them. I got pictures of myself standing next to one but can't find them.